Human Genetics: Concepts and Applications (Lewis), 9th EditionChapter 13:
ChromosomesChapter OutlineCHAPTER OVERVIEW
Cytogenetics is a branch of genetics that links chromosome variations to specific traits. This chapter begins with a description of chromosome morphology and the methods used to generate karyotypes. Fluorescence in situ hybridization (FISH) can be used to identify specific chromosomes or genes. Chromosomal aneuploids are responsible for a variety of disorders. The structure of individual chromosomes can be affected by deletions, duplications, inversions, or translocations. In disorders resulting from uniparental disomy (UPD), both members of a chromosome pair, or parts of them, are derived from one parent. UPD illnesses are examples of chromosome abnormalities that are associated with an apparently normal karyotype.CHAPTER OUTLINE13.1 Portrait of a Chromosome- Some mutations are observable at the chromosome level, and these large alterations are the focus of this chapter.
- Excess or deficient genetic material can cause medical syndromes or damage prenatal development.
- Cytogenetics is the study of chromosome abnormalities and associated effects on health or other traits.
Required Parts: Telomeres and Centromeres- Chromosomes consist of DNA and proteins. Staining reveals dark regions termed heterochromatin and lighter areas called euchromatin.
- Telomeres consist of repeat sequences and protect chromosome tips.
- A centromere is a constricted site where spindle fibers attach during cell division.
- Centromeres are regions of repeated DNA bound to centromere-associated proteins.
Karyotypes Chart Chromosomes- Karyotypes are charts that display chromosomes in size order.
- Chromosomes are numbered from largest to smallest, 1 through 22, plus X and Y.
- Chromosomes are distinguished by size, centromere location, differential staining, and DNA probes.
- The short arm of a chromosome is called the "p" arm and the long arm is
designated "q."
- Five human chromosomes (13, 14, 15, 21, and 22) have satellites, which carry repeats of genes encoding ribosomal components.
- Translocations result in exchanges of material between two chromosomes.
- Some cancers arise from translocations.
13.2 Visualizing ChromosomesObtaining Cells for Chromosome Study- Any cell with a nucleus can be used to obtain chromosomes to prepare a karyotype.
- Fetal karyotypes are constructed from cells obtained by amniocentesis, chorionic villus sampling, and chromosome microarray analysis.
- Fetal karyotypes are prepared for patients with advanced maternal age, repeated miscarriages, and increased risk of a chromosomal anomaly as indicated by a maternal serum marker test or family history.
- Techniques are also available to separate fetal cells, DNA and RNA from maternal blood for screening and analysis.
Preparing Cells for Chromosome Observation- To obtain chromosomes for karyotyping, cells are halted in metaphase, broken open on a glass slide, and the chromosomes spread over the surface.
- Traditionally, chromosomes were stained, identified, and arranged in order of size and centromere location.
- Newer, fluorescent in situ hybridization (FISH) techniques use chromosome specific probes and fluorescent dyes to "paint" chromosomes and create karyotypes.
- Chromosomal shorthand describes the total number of chromosomes, types of sex chromosomes, and any aberrations present.
- Ideograms are maps of the distinguishing features of individual chromosomes.
13.3 Abnormal Chromosome NumberPolyploidy- Polyploid cells have extra chromosome sets and are designated by the number of complete sets they contain — triploid, tetraploid, etc.
- They may result from fertilization of an oocyte by two sperm or one sperm fertilizing a diploid oocyte.
- Polyploidy is tolerated in plants, but is a common cause of spontaneous abortion in humans.
Aneuploidy- Aneuploidy refers to the loss or gain of individual chromosomes. A euploid cell has a normal chromosome number (46).
- Individuals with trisomies are more likely to survive than those with monosomies.
- Sex chromosome aneuploidy is less severe than autosomal aneuploidy.
- This condition most often results from meiotic nondisjunction.
- The most common autosomal aneuploids seen in newborns are trisomies 13, 18
and 21.
- Sex chromosome aneuploids include XO (Turner syndrome), triplo-X females, XXY males (Klinefelter syndrome), and XYY males.
13.4 Abnormal Chromosome StructureDeletions and Duplications- Deletions and duplications are considered copy number variants.
- Many microduplications and microdeletions are too small to be detected by traditional karyotyping techniques but have important implications for health.
- These are detected by comparative genome hybridization.
Translocation Down Syndrome- In a Robertsonian translocation, the two long arms of nonhomologous chromosomes fuse, creating one large translocation chromosome. The short arms are lost.
- In a reciprocal translocation, two nonhomologous chromosomes exchange parts.
- A translocation that deletes, duplicates, or disrupts a gene can harm health.
- Translocation carriers may have a normal phenotype but may have affected children.
Inversions
- Inversions result when part of a chromosome flips, and may affect health.
Isochromosomes and Ring Chromosomes- An isochromosome has two identical arms and therefore introduces duplications and deletions.
- Isochromosomes arise in meiosis when the centromere splits in the wrong plane.
- Ring chromosomes arise when telomeres are lost, leaving sticky ends that close and form rings.
- While ring chromosomes are usually comprised of DNA repeats and do not affect health, some can produce symptoms.
13.5 Uniparental Disomy — A Double Dose from One Parent- Uniparental disomy (UPD) results when two chromosomes or chromosome parts are inherited from the same parent, doubling part of one parent's contribution.
- UPD can arise from a trisomy and subsequent chromosome loss, or from two nondisjunction events.
- UPD can cause disease if it creates a homozygous recessive condition associated with an illness.
- UPD can also cause disease by disrupting genomic imprinting.
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